"Josh is obviously disappointed in the choice to use the franchise tender," agent Ken Harris told ESPN NFL Insider Adam Schefter. "While we have no plans of signing the tender at this point, we'll see if the long-term contract Josh deserves can eventually be reached."
General manager Gene Smith said the team wants to reach a long-term deal with Scobee. Both sides began preliminary talks last month, but they failed to reach an agreement before the franchise deadline Monday.
"It is our goal to reach a long-term deal with him," Smith said in a statement. "Josh was drafted by the Jaguars and is someone that I have great respect for as a player and as a person."
Scobee has made it clear he would prefer to stay in Jacksonville, where he has grown accustomed to year-round weather that suits his love of golf. But he didn't want to be tagged.
The franchise tag for kickers is estimated to pay Scobee around $2.6 million in 2012, but it doesn't offer as much security as a long-term contract. Scobee's last contract paid him $2 million annually.
"Thank u fans for the support but u should know the franchise tag ISN'T good for players," Scobee posted on his Twitter page Monday. "Long term deal is the objective."
As long as Scobee doesn't sign it, his agent can negotiate with other teams once free agency begins March 13. Franchised players usually stay put because it costs another team two first-round draft picks to sign them, and there's little chance anyone would give that much up for a kicker.
A fifth-round draft pick from Louisiana Tech in 2004, Scobee has spent his entire career in Jacksonville. He has made 79 percent of his field goals -- most of the misses have been from long range -- and needs just 10 points to break Mike Hollis' franchise record. Scobee also is nine field goals away from breaking Hollis' franchise record for field goals (175).
Scobee has converted 18 of 29 field goals from 50-plus yards, and has 145 career touchbacks.
Last season was his best. He made 92 percent of his field goals (23 of 25) and connected on 15 in a row to start the season. Of his 23 field goals, 12 were 40 yards or longer and five were from beyond 50 yards. His five 50-plus-yarders were the most in team history and tied for sixth in the NFL. He also set a franchise record with 39 touchbacks on 62 kickoffs, and 58 of his 62 kickoffs reached the end zone.
Information from The Associated Press contributed to this report.