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Germany international Werner told Sport 1 he would only begin to think about his future after the World Cup.
The Bundesliga had its second-highest first-half attendance as more than 6.6 million fans passed through the gates of the league's stadiums.
Bayern Munich goalkeeper Manuel Neuer has continued his recovery from a broken left foot with a trip to Phuket.
Borussia Dortmund have been fined €50,000 because of their fans' behaviour at three matches during the first months of the season.
Watzke, who has been in charge since 2005, had been under contract until the end of 2019 but has now agreed new terms.
Two clubs will "come together to exchange talent, allowing young players to experience different coaching to enhance their development," Bayern say.